threeML package

Subpackages

• threeML.bayesian package
  • Submodules
    • threeML.bayesian.autoemcee_sampler module
    • threeML.bayesian.bayesian_analysis module
    • threeML.bayesian.dynesty_sampler module
    • threeML.bayesian.emcee_sampler module
    • threeML.bayesian.multinest_sampler module
    • threeML.bayesian.nautilus_sampler module
    • threeML.bayesian.sampler_base module
    • threeML.bayesian.tutorial_material module
    • threeML.bayesian.ultranest_sampler module
    • threeML.bayesian.zeus_sampler module
  • Module contents
• threeML.catalogs package
  • Submodules
    • threeML.catalogs.Fermi module
    • threeML.catalogs.FermiGBM module
    • threeML.catalogs.FermiLAT module
    • threeML.catalogs.FermiLLE module
    • threeML.catalogs.Swift module
    • threeML.catalogs.VirtualObservatoryCatalog module
    • threeML.catalogs.catalog_utils module
  • Module contents
• threeML.classicMLE package
  • Submodules
    • threeML.classicMLE.goodness_of_fit module
    • threeML.classicMLE.joint_likelihood module
    • threeML.classicMLE.joint_likelihood_set module
    • threeML.classicMLE.likelihood_ratio_test module
  • Module contents
• threeML.config package
  • Submodules
    • threeML.config.catalog_structure module
      • CatalogServer
        • CatalogServer.url
      • Catalogs
        • Catalogs.Fermi
        • Catalogs.Swift
      • InstrumentCatalog
        • InstrumentCatalog.catalogs
      • PublicDataServer
        • PublicDataServer.public_ftp_location
        • PublicDataServer.public_http_location
        • PublicDataServer.query_form
    • threeML.config.config module
    • threeML.config.config_structure module
      • Config
        • Config.GBM
        • Config.LAT
        • Config.bayesian
        • Config.catalogs
        • Config.interface
        • Config.logging
        • Config.mle
        • Config.model_plot
        • Config.parallel
        • Config.plotting
        • Config.plugins
        • Config.point_source
        • Config.time_series
      • Interface
        • Interface.multi_progress_cmap
        • Interface.multi_progress_color
        • Interface.progress_bar_color
        • Interface.progress_bars
      • Logging
        • Logging.console
        • Logging.developer
        • Logging.level
        • Logging.path
        • Logging.startup_warnings
        • Logging.usr
      • LoggingLevel
        • LoggingLevel.CRITICAL
        • LoggingLevel.DEBUG
        • LoggingLevel.ERROR
        • LoggingLevel.INFO
        • LoggingLevel.WARNING
      • Parallel
        • Parallel.profile_name
        • Parallel.use_joblib
        • Parallel.use_parallel
    • threeML.config.config_utils module
    • threeML.config.fitting_structure module
      • BayesianDefault
        • BayesianDefault.corner_style
        • BayesianDefault.default_sampler
        • BayesianDefault.dynesty_dynmaic_setup
        • BayesianDefault.dynesty_nested_setup
        • BayesianDefault.emcee_setup
        • BayesianDefault.multinest_setup
        • BayesianDefault.ultranest_setup
        • BayesianDefault.use_median_fit
        • BayesianDefault.zeus_setup
      • MLEDefault
        • MLEDefault.contour_background
        • MLEDefault.contour_cmap
        • MLEDefault.contour_level_1
        • MLEDefault.contour_level_2
        • MLEDefault.contour_level_3
        • MLEDefault.default_minimizer
        • MLEDefault.default_minimizer_algorithm
        • MLEDefault.default_minimizer_callback
        • MLEDefault.profile_color
        • MLEDefault.profile_level_1
        • MLEDefault.profile_level_2
        • MLEDefault.profile_level_3
      • Optimizer
        • Optimizer.ROOT
        • Optimizer.minuit
        • Optimizer.scipy
      • Sampler
        • Sampler.autoemcee
        • Sampler.dynesty_dynamic
        • Sampler.dynesty_nested
        • Sampler.emcee
        • Sampler.multinest
        • Sampler.ultranest
        • Sampler.zeus
    • threeML.config.plotting_structure module
      • BinnedSpectrumPlot
        • BinnedSpectrumPlot.background_cmap
        • BinnedSpectrumPlot.background_color
        • BinnedSpectrumPlot.background_mpl_kwargs
        • BinnedSpectrumPlot.data_cmap
        • BinnedSpectrumPlot.data_color
        • BinnedSpectrumPlot.data_mpl_kwargs
        • BinnedSpectrumPlot.model_cmap
        • BinnedSpectrumPlot.model_color
        • BinnedSpectrumPlot.model_mpl_kwargs
        • BinnedSpectrumPlot.n_colors
        • BinnedSpectrumPlot.show_background
        • BinnedSpectrumPlot.show_legend
        • BinnedSpectrumPlot.show_residuals
        • BinnedSpectrumPlot.step
      • ContourStyle
        • ContourStyle.alpha
      • CornerStyle
        • CornerStyle.bins
        • CornerStyle.cmap
        • CornerStyle.contourf_kwargs
        • CornerStyle.extremes
        • CornerStyle.fill_contours
        • CornerStyle.levels
        • CornerStyle.quantiles
        • CornerStyle.show_titles
        • CornerStyle.smooth
        • CornerStyle.title_fmt
      • DataHistPlot
        • DataHistPlot.background_color
        • DataHistPlot.bad_channels_color
        • DataHistPlot.counts_color
        • DataHistPlot.masked_channels_color
        • DataHistPlot.warn_channels_color
      • FermiSpectrumPlot
        • FermiSpectrumPlot.background_cmap
        • FermiSpectrumPlot.background_color
        • FermiSpectrumPlot.background_mpl_kwargs
        • FermiSpectrumPlot.data_cmap
        • FermiSpectrumPlot.data_color
        • FermiSpectrumPlot.data_mpl_kwargs
        • FermiSpectrumPlot.fixed_sources_color
        • FermiSpectrumPlot.model_cmap
        • FermiSpectrumPlot.model_color
        • FermiSpectrumPlot.model_mpl_kwargs
        • FermiSpectrumPlot.secondary_sources_color
        • FermiSpectrumPlot.shade_fixed_sources
        • FermiSpectrumPlot.shade_secondary_sources
        • FermiSpectrumPlot.show_background_sources
        • FermiSpectrumPlot.show_legend
        • FermiSpectrumPlot.show_residuals
        • FermiSpectrumPlot.step
        • FermiSpectrumPlot.total_model_color
      • GenericPlotting
        • GenericPlotting.mplstyle
        • GenericPlotting.residual_plot
        • GenericPlotting.use_threeml_style
      • LegendStyle
        • LegendStyle.fancybox
        • LegendStyle.loc
        • LegendStyle.shadow
      • MPLCmap
        • MPLCmap.Accent
        • MPLCmap.Accent_r
        • MPLCmap.Blues
        • MPLCmap.Blues_r
        • MPLCmap.BrBG
        • MPLCmap.BrBG_r
        • MPLCmap.BuGn
        • MPLCmap.BuGn_r
        • MPLCmap.BuPu
        • MPLCmap.BuPu_r
        • MPLCmap.CMRmap
        • MPLCmap.CMRmap_r
        • MPLCmap.Dark2
        • MPLCmap.Dark2_r
        • MPLCmap.GnBu
        • MPLCmap.GnBu_r
        • MPLCmap.Grays
        • MPLCmap.Greens
        • MPLCmap.Greens_r
        • MPLCmap.Greys
        • MPLCmap.Greys_r
        • MPLCmap.OrRd
        • MPLCmap.OrRd_r
        • MPLCmap.Oranges
        • MPLCmap.Oranges_r
        • MPLCmap.PRGn
        • MPLCmap.PRGn_r
        • MPLCmap.Paired
        • MPLCmap.Paired_r
        • MPLCmap.Pastel1
        • MPLCmap.Pastel1_r
        • MPLCmap.Pastel2
        • MPLCmap.Pastel2_r
        • MPLCmap.PiYG
        • MPLCmap.PiYG_r
        • MPLCmap.PuBu
        • MPLCmap.PuBuGn
        • MPLCmap.PuBuGn_r
        • MPLCmap.PuBu_r
        • MPLCmap.PuOr
        • MPLCmap.PuOr_r
        • MPLCmap.PuRd
        • MPLCmap.PuRd_r
        • MPLCmap.Purples
        • MPLCmap.Purples_r
        • MPLCmap.RdBu
        • MPLCmap.RdBu_r
        • MPLCmap.RdGy
        • MPLCmap.RdGy_r
        • MPLCmap.RdPu
        • MPLCmap.RdPu_r
        • MPLCmap.RdYlBu
        • MPLCmap.RdYlBu_r
        • MPLCmap.RdYlGn
        • MPLCmap.RdYlGn_r
        • MPLCmap.Reds
        • MPLCmap.Reds_r
        • MPLCmap.Set1
        • MPLCmap.Set1_r
        • MPLCmap.Set2
        • MPLCmap.Set2_r
        • MPLCmap.Set3
        • MPLCmap.Set3_r
        • MPLCmap.Spectral
        • MPLCmap.Spectral_r
        • MPLCmap.Wistia
        • MPLCmap.Wistia_r
        • MPLCmap.YlGn
        • MPLCmap.YlGnBu
        • MPLCmap.YlGnBu_r
        • MPLCmap.YlGn_r
        • MPLCmap.YlOrBr
        • MPLCmap.YlOrBr_r
        • MPLCmap.YlOrRd
        • MPLCmap.YlOrRd_r
        • MPLCmap.afmhot
        • MPLCmap.afmhot_r
        • MPLCmap.autumn
        • MPLCmap.autumn_r
        • MPLCmap.binary
        • MPLCmap.binary_r
        • MPLCmap.bone
        • MPLCmap.bone_r
        • MPLCmap.brg
        • MPLCmap.brg_r
        • MPLCmap.bwr
        • MPLCmap.bwr_r
        • MPLCmap.cividis
        • MPLCmap.cividis_r
        • MPLCmap.cool
        • MPLCmap.cool_r
        • MPLCmap.coolwarm
        • MPLCmap.coolwarm_r
        • MPLCmap.copper
        • MPLCmap.copper_r
        • MPLCmap.cubehelix
        • MPLCmap.cubehelix_r
        • MPLCmap.flag
        • MPLCmap.flag_r
        • MPLCmap.gist_earth
        • MPLCmap.gist_earth_r
        • MPLCmap.gist_gray
        • MPLCmap.gist_gray_r
        • MPLCmap.gist_grey
        • MPLCmap.gist_heat
        • MPLCmap.gist_heat_r
        • MPLCmap.gist_ncar
        • MPLCmap.gist_ncar_r
        • MPLCmap.gist_rainbow
        • MPLCmap.gist_rainbow_r
        • MPLCmap.gist_stern
        • MPLCmap.gist_stern_r
        • MPLCmap.gist_yarg
        • MPLCmap.gist_yarg_r
        • MPLCmap.gist_yerg
        • MPLCmap.gnuplot
        • MPLCmap.gnuplot2
        • MPLCmap.gnuplot2_r
        • MPLCmap.gnuplot_r
        • MPLCmap.gray
        • MPLCmap.gray_r
        • MPLCmap.grey
        • MPLCmap.hot
        • MPLCmap.hot_r
        • MPLCmap.hsv
        • MPLCmap.hsv_r
        • MPLCmap.inferno
        • MPLCmap.inferno_r
        • MPLCmap.jet
        • MPLCmap.jet_r
        • MPLCmap.magma
        • MPLCmap.magma_r
        • MPLCmap.nipy_spectral
        • MPLCmap.nipy_spectral_r
        • MPLCmap.ocean
        • MPLCmap.ocean_r
        • MPLCmap.pink
        • MPLCmap.pink_r
        • MPLCmap.plasma
        • MPLCmap.plasma_r
        • MPLCmap.prism
        • MPLCmap.prism_r
        • MPLCmap.rainbow
        • MPLCmap.rainbow_r
        • MPLCmap.seismic
        • MPLCmap.seismic_r
        • MPLCmap.spring
        • MPLCmap.spring_r
        • MPLCmap.summer
        • MPLCmap.summer_r
        • MPLCmap.tab10
        • MPLCmap.tab10_r
        • MPLCmap.tab20
        • MPLCmap.tab20_r
        • MPLCmap.tab20b
        • MPLCmap.tab20b_r
        • MPLCmap.tab20c
        • MPLCmap.tab20c_r
        • MPLCmap.terrain
        • MPLCmap.terrain_r
        • MPLCmap.turbo
        • MPLCmap.turbo_r
        • MPLCmap.twilight
        • MPLCmap.twilight_r
        • MPLCmap.twilight_shifted
        • MPLCmap.twilight_shifted_r
        • MPLCmap.viridis
        • MPLCmap.viridis_r
        • MPLCmap.winter
        • MPLCmap.winter_r
      • ModelPlotting
        • ModelPlotting.point_source_plot
      • PlotStyle
        • PlotStyle.linestyle
        • PlotStyle.linewidth
      • PointSourcePlot
        • PointSourcePlot.bayes_cmap
        • PointSourcePlot.contour_cmap
        • PointSourcePlot.contour_style
        • PointSourcePlot.emax
        • PointSourcePlot.emin
        • PointSourcePlot.ene_unit
        • PointSourcePlot.fit_cmap
        • PointSourcePlot.flux_unit
        • PointSourcePlot.legend_style
        • PointSourcePlot.num_ene
        • PointSourcePlot.plot_style
        • PointSourcePlot.show_legend
      • ResidualPlot
        • ResidualPlot.legend_font_size
        • ResidualPlot.linewidth
        • ResidualPlot.marker
        • ResidualPlot.size
    • threeML.config.plugin_structure module
      • Fermipy
        • Fermipy.fit_plot
      • OGIP
        • OGIP.data_plot
        • OGIP.fit_plot
        • OGIP.response_cmap
        • OGIP.response_zero_color
      • Photo
        • Photo.fit_plot
      • Plugins
        • Plugins.fermipy
        • Plugins.ogip
        • Plugins.photo
      • TimeSeries
        • TimeSeries.background_color
        • TimeSeries.background_selection_color
        • TimeSeries.fit
        • TimeSeries.light_curve_color
        • TimeSeries.selection_color
      • TimeSeriesFit
        • TimeSeriesFit.bayes
        • TimeSeriesFit.fit_poly
        • TimeSeriesFit.unbinned
    • threeML.config.point_source_structure module
      • IntegrateMethod
        • IntegrateMethod.quad
        • IntegrateMethod.trapz
      • PointSourceDefaults
        • PointSourceDefaults.integrate_flux_method
        • PointSourceDefaults.max_number_samples
  • Module contents
• threeML.exceptions package
  • Submodules
    • threeML.exceptions.custom_exceptions module
  • Module contents
• threeML.io package
  • Subpackages
    • threeML.io.cern_root_utils package
      • Submodules
        • threeML.io.cern_root_utils.io_utils module
        • threeML.io.cern_root_utils.tobject_to_numpy module
      • Module contents
    • threeML.io.plotting package
      • Submodules
        • threeML.io.plotting.cmap_cycle module
        • threeML.io.plotting.data_residual_plot module
        • threeML.io.plotting.get_style module
        • threeML.io.plotting.light_curve_plots module
        • threeML.io.plotting.model_plot module
        • threeML.io.plotting.post_process_data_plots module
        • threeML.io.plotting.step_plot module
      • Module contents
  • Submodules
    • threeML.io.calculate_flux module
    • threeML.io.configuration module
    • threeML.io.detect_notebook module
    • threeML.io.dict_with_pretty_print module
    • threeML.io.download_from_ftp module
    • threeML.io.download_from_http module
    • threeML.io.file_utils module
    • threeML.io.fits_file module
    • threeML.io.get_heasarc_table_as_pandas module
    • threeML.io.hdf5_utils module
    • threeML.io.logging module
    • threeML.io.network module
    • threeML.io.package_data module
      • get_path_of_data_dir()
      • get_path_of_data_file()
      • get_path_of_user_config()
      • get_path_of_user_dir()
    • threeML.io.results_table module
    • threeML.io.rich_display module
    • threeML.io.serialization module
    • threeML.io.suppress_stdout module
    • threeML.io.table module
    • threeML.io.uncertainty_formatter module
  • Module contents
• threeML.minimizer package
  • Submodules
    • threeML.minimizer.ROOT_minimizer module
    • threeML.minimizer.grid_minimizer module
    • threeML.minimizer.minimization module
    • threeML.minimizer.minuit_minimizer module
    • threeML.minimizer.multinest_minimizer module
    • threeML.minimizer.pagmo_minimizer module
    • threeML.minimizer.scipy_minimizer module
    • threeML.minimizer.tutorial_material module
  • Module contents
• threeML.parallel package
  • Submodules
    • threeML.parallel.parallel_client module
  • Module contents
• threeML.plugins package
  • Subpackages
    • threeML.plugins.experimental package
      • Submodules
        • threeML.plugins.experimental.CastroLike module
        • threeML.plugins.experimental.SherpaLike module
        • threeML.plugins.experimental.VERITASLike module
      • Module contents
  • Submodules
    • threeML.plugins.DispersionSpectrumLike module
    • threeML.plugins.FermiLATLike module
    • threeML.plugins.FermipyLike module
    • threeML.plugins.HAWCLike module
    • threeML.plugins.OGIPLike module
    • threeML.plugins.PhotometryLike module
    • threeML.plugins.SpectrumLike module
    • threeML.plugins.SwiftXRTLike module
    • threeML.plugins.UnbinnedPoissonLike module
    • threeML.plugins.UnresolvedExtendedXYLike module
    • threeML.plugins.XYLike module
  • Module contents
• threeML.test package
  • Submodules
    • threeML.test.conftest module
    • threeML.test.generate_pha module
    • threeML.test.test_AAA_against_xspec module
    • threeML.test.test_FermiLATLike module
    • threeML.test.test_FermipyLike module
    • threeML.test.test_UnresolvedExtendedXYLike module
    • threeML.test.test_XYLike module
    • threeML.test.test_analysis_results module
    • threeML.test.test_basic module
    • threeML.test.test_bayesian module
    • threeML.test.test_catalogs module
    • threeML.test.test_configuration module
    • threeML.test.test_download_GBM_data module
    • threeML.test.test_download_LAT_data module
    • threeML.test.test_event_list module
    • threeML.test.test_file_utils module
    • threeML.test.test_fits_file module
    • threeML.test.test_fitted_point_sources module
    • threeML.test.test_generic module
    • threeML.test.test_get_package_data module
    • threeML.test.test_goodness_of_fit module
    • threeML.test.test_hawc module
    • threeML.test.test_histogram module
    • threeML.test.test_joint_likelihood_set module
    • threeML.test.test_minimizers module
    • threeML.test.test_model_from_catalog module
    • threeML.test.test_ogip module
    • threeML.test.test_photometry_utils module
    • threeML.test.test_plotting module
    • threeML.test.test_plugin_loading module
    • threeML.test.test_power_of_two_utils module
    • threeML.test.test_response module
    • threeML.test.test_spectrum_class module
    • threeML.test.test_spectrumlike module
    • threeML.test.test_time_energy_fit module
    • threeML.test.test_time_interval module
    • threeML.test.test_time_series module
    • threeML.test.test_unbinned_poisson_like module
    • threeML.test.test_verbosity module
  • Module contents
• threeML.utils package
  • Subpackages
    • threeML.utils.OGIP package
      • Submodules
        • threeML.utils.OGIP.pha module
        • threeML.utils.OGIP.response module
      • Module contents
    • threeML.utils.data_builders package
      • Subpackages
        • threeML.utils.data_builders.fermi package
          • Submodules
            • threeML.utils.data_builders.fermi.gbm_data module
            • threeML.utils.data_builders.fermi.lat_data module
            • threeML.utils.data_builders.fermi.lat_transient_builder module
            • threeML.utils.data_builders.fermi.test module
          • Module contents
      • Submodules
        • threeML.utils.data_builders.time_series_builder module
      • Module contents
    • threeML.utils.data_download package
      • Subpackages
        • threeML.utils.data_download.Fermi_GBM package
          • Submodules
            • threeML.utils.data_download.Fermi_GBM.download_GBM_data module
          • Module contents
        • threeML.utils.data_download.Fermi_LAT package
          • Submodules
            • threeML.utils.data_download.Fermi_LAT.download_LAT_data module
            • threeML.utils.data_download.Fermi_LAT.download_LLE_data module
          • Module contents
      • Module contents
    • threeML.utils.fitted_objects package
      • Submodules
        • threeML.utils.fitted_objects.fitted_point_sources module
        • threeML.utils.fitted_objects.fitted_source_handler module
      • Module contents
    • threeML.utils.photometry package
      • Submodules
        • threeML.utils.photometry.filter_library module
        • threeML.utils.photometry.filter_set module
        • threeML.utils.photometry.photometric_observation module
      • Module contents
    • threeML.utils.polarization package
      • Submodules
        • threeML.utils.polarization.binned_polarization module
      • Module contents
    • threeML.utils.spectrum package
      • Submodules
        • threeML.utils.spectrum.binned_spectrum module
        • threeML.utils.spectrum.binned_spectrum_set module
        • threeML.utils.spectrum.pha_spectrum module
        • threeML.utils.spectrum.share_spectrum module
        • threeML.utils.spectrum.spectrum_likelihood module
      • Module contents
    • threeML.utils.statistics package
      • Submodules
        • threeML.utils.statistics.gammaln module
        • threeML.utils.statistics.likelihood_functions module
        • threeML.utils.statistics.stats_tools module
      • Module contents
    • threeML.utils.time_series package
      • Submodules
        • threeML.utils.time_series.binned_spectrum_series module
        • threeML.utils.time_series.event_list module
        • threeML.utils.time_series.polynomial module
        • threeML.utils.time_series.time_series module
      • Module contents
  • Submodules
    • threeML.utils.bayesian_blocks module
    • threeML.utils.binner module
    • threeML.utils.cartesian module
    • threeML.utils.differentiation module
    • threeML.utils.fermi_relative_mission_time module
    • threeML.utils.histogram module
    • threeML.utils.interval module
    • threeML.utils.numba_utils module
    • threeML.utils.power_of_two_utils module
    • threeML.utils.progress_bar module
    • threeML.utils.step_parameter_generator module
    • threeML.utils.string_utils module
    • threeML.utils.time_interval module
    • threeML.utils.unique_deterministic_tag module
  • Module contents

Submodules

• threeML.analysis_results module
• threeML.data_list module
• threeML.plugin_prototype module
• threeML.random_variates module

Module contents